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Research Articles

Collection of Research Articles
Cell-Specific Information Processing in Segregating Populations of Eph Receptor Ephrin–Expressing Cells.
Science. 2009 Dec 11;326(5959):1502-9.
Protein disorder prediction: implications for structural proteomics.
Structure. 2003 Nov;11(11):1453-9.
A comparative study of the relationship between protein structure and beta-aggregation in globular and intrinsically disordered proteins.
J Mol Biol. 2004 Sep 3;342(1):345-53.
Systematic discovery of new recognition peptides mediating protein interaction networks.
PLoS Biol. 2005 Dec;3(12):e405. Epub 2005 Nov 15.
ELM server: A new resource for investigating short functional sites in modular eukaryotic proteins.
Nucleic Acids Res. 2003 Jul 1;31(13):3625-30.
GlobPlot: Exploring protein sequences for globularity and disorder.
Nucleic Acids Res. 2003 Jul 1;31(13):3701-8.
BLAST2SRS, a web server for flexible retrieval of related protein sequences in the SWISS-PROT and SPTrEMBL databases.
Nucleic Acids Res. 2003 Jul 1;31(13):3792-4.
WW domains provide a platform for the assembly of multiprotein networks.
Mol Cell Biol. 2005 Aug;25(16):7092-106.
Modulation of the chromatin phosphoproteome by the haspin protein kinase.
Mol Cell Proteomics. 2014 Jul;13(7):1724-40.
KinomeXplorer: an integrated platform for kinome biology studies.
Nat Methods. 2014 Jun;11(6):603-4.
Identification of Hypoxia-Regulated Proteins Using MALDI-Mass Spectrometry Imaging Combined with Quantitative Proteomics.
J Proteome Res. 2014 Apr 24.
CoreFlow: a computational platform for integration, analysis and modeling of complex biological data.
J Proteomics. 2014 Apr 4;100:167-73.
Global characterization of signalling networks associated with tamoxifen resistance in breast cancer.
FEBS Journal 2013 Jul 22.
In Vivo SILAC-Based Proteomics Reveals Phosphoproteome Changes during Mouse Skin Carcinogenesis
Cell Reports. 2013 Jan 30. pii: S2211-1247(13)00010-7.
Navigating cancer network attractors for tumor-specific therapy
Nature Biotechnology 30, 842–848 (2012)
Mutational Properties of Amino Acid Residues - Implications for Evolvability of Phosphorylatable Residues
Phil. Trans. R. Soc. B 19 September 2012 vol. 367 no. 1602 2584-2593
Recommendations for mass spectrometry data quality metrics for open access data (corollary to the Amsterdam principles).
Proteomics Clin Appl. 2011 Dec;5(11-12):580-9.
Recommendations for mass spectrometry data quality metrics for open access data (corollary to the Amsterdam principles).
Proteomics. 2012 Jan;12(1):11-20.
Recommendations for mass spectrometry data quality metrics for open access data (Corollary to the Amsterdam principles).
J Proteome Res. 2012 Feb 3;11(2):1412-9.
Recommendations for mass spectrometry data quality metrics for open access data (Corollary to the Amsterdam principles).
Mol Cell Proteomics. 2011 Dec;10(12):O111.015446.

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